FUJIKI Ryo

Affiliation

Life Science Center for Survival Dynamics, Tsukuba Advanced Research Alliance (TARA)

Official title

Assistant Professor

ORCID

Research fields


Computational science
Bio-related chemistry

Research keywords


分子動力学シミュレーション、液体の統計力学理論、3D-RISM、酸解離定数、pKa、ZIP

Research projects


液体の統計力学理論に基づくZIP8タンパク質のイオン輸送の理論的研究	2023-10 -- 2025-03	藤木　涼	科研費/科研費研究活動スタート支援

Career history


2022-10 -- 2024-01	筑波大学計算科学研究センター研究員

Academic background


2016-04 -- 2022-09	九州大学理学府化学専攻
2012-04 -- 2016-03	九州大学理学部化学科

Degree


2022-09	博士（理学）	九州大学

Articles

Evaluating solubility, stability, and inclusion complexation of oxyresveratrol with various β-cyclodextrin derivatives using advanced computational techniques and experimental validation
Ali Saba; Aman Aamir; Hengphasatporn Kowit; Oopkaew L...
COMPUTATIONAL BIOLOGY AND CHEMISTRY/112, 2024-10
A computational scheme of pKa values based on the three-dimensional reference interaction site model self-consistent field theory coupled with the linear fitting correction scheme
Fujiki Ryo
Physical Chemistry Chemical Physics, 2018-08
Computational Analysis of the SARS-CoV-2 RBD–ACE2-Binding Process Based on MD and the 3D-RISM Theory
Fujiki Ryo
Journal of Chemical Information and Modeling, 2022-05
Structure—yeast α-glucosidase inhibitory activity relationship of 9-O-berberrubine carboxylates
Fujiki Ryo
Scientific Reports, 2023-11
Assessment of the applicability of the LFC/3D-RISM-SCF scheme for pKa prediction in methanol solutions
Fujiki Ryo
CHEMISTRY LETTERS/53(1), 2024-01
Structural and thermodynamic insights into antibody light chain tetramer formation through 3D domain swapping
Fujiki Ryo
Nature Communications, 2023-12

Conference, etc.

構造情報を基盤とした改変抗体設計に向けた抗ボツリヌス毒素中和抗体の構造解析
廣田　小太郎; 原田　彩佳; 藤木　涼; 片平　じゅん; 幸田知子; 岩崎憲治
2024年度TARAセミナー・生理研研究会/2024-10-29--2024-10-30
抗ボツリヌス毒素中和抗体の毒素中和機構解明に向けた結晶構造解析及び分子動力学計算
廣田小太郎; 原田彩佳; 藤木涼; 片平じゅん; 幸田知子; 岩崎憲治
第70回トキシンシンポジウム/2024-08-30--2024-08-31

(Last updated: 2024-05-08)