SHICHINO Yuichi
- Affiliation
- Institute of Medicine
- Official title
- Professor
- Research fields
Molecular biology - Research keywords
RNA translation ribosome profiling - Research projects
リソソームを「反応場」とする翻訳・複合体形成・局在化の協奏 2025-04 -- 2028-03 七野 悠一 日本学術振興会/Grant-in-Aid for Transformative Research Areas (B) 33,930,000Yen 翻訳と反応場から考える蛋白質の新しい社会像の領域推進 2025-04 -- 2028-03 小林 穂高 日本学術振興会/Grant-in-Aid for Transformative Research Areas(B) 5,980,000Yen 非膜性オルガネラによるRNA時空間制御を介したDNA損傷応答 2023-10 -- 2027-03 七野悠一 日本医療研究開発機構/革新的先端研究開発支援事業 ソロタイプ「ストレスへの応答と疾病発症に至るメカニズムの解明」研究開発領域 52,000,000Yen 細胞内顆粒P-bodyによるmRNAの空間的制御を介した細胞周期調節機構 2023-04 -- 2026-03 七野 悠一 日本学術振興会/Grant-in-Aid for Scientific Research 4,680,000Yen 非典型局所翻訳を包括的に解明するAPEX-Ribo-Seq法の確立 2023-04 -- 2025-03 七野 悠一 Ministry of Education, Culture, Sports, Science and Technology, Japan/Grant-in-Aid for Transformative Research Areas(A) 10,400,000Yen APEX-Ribo-Seq: 近傍標識による非典型局所翻訳の網羅解析 2021-09 -- 2023-03 七野 悠一 Ministry of Education, Culture, Sports, Science and Technology, Japan/Grant-in-Aid for Transformative Research Areas(A) 10,400,000Yen Cooperative expression regulation by eukaryotic translation initiation factor eIF4A1 and glutamine metabolism 2021-04 -- 2023-03 Shichino Yuichi Japan Society for the Promotion of Science/若手研究 4,550,000Yen 基本翻訳因子パラログに潜む選択性を利用した環境適応機構 2019-04 -- 2020-03 七野 悠一 日本学術振興会/Grant-in-Aid for JSPS Fellows 4,810,000Yen 分裂酵母の減数分裂に必須なノンコーディングRNAであるmeiRNAの局在化機構 2011 -- 2013 七野 悠一 日本学術振興会/Grant-in-Aid for JSPS Fellows 1,900,000Yen - Career history
2025-09 -- (current) University of TsukubaInstitute of MedicineProfessor 2025-04 -- 2025-08 RIKENPioneering Research InsistuteSenior scientist 2022-04 -- 2025-03 RIKENCluster for Pioneering ResearchResearch Scientist 2022-04 -- 2025-08 Tokyo University of ScienceInstitute of Arts and SciencesPart-time Lecturer 2020-04 -- 2022-03 RIKENRNA Systems Biochemistry Laboratory, Cluster for Pioneering ResearchSpecial Postdoctoral Researcher 2019-04 -- 2020-03 JSPSPostdoctoral Researcher 2019-04 -- 2020-03 RIKENRNA Systems Biochemistry Laboratory, Cluster for Pioneering ResearchVisiting researcher 2017-04 -- 2019-03 RIKENRNA Systems Biochemistry LaboratoryPostdoctoral Researcher 2014-07 -- 2017-03 National Institute for Basic BiologyLaboratory of Cell ResponsesResearcher 2011-04 -- 2014-03 JSPS特別研究員(DC1) - Academic background
2011-04 -- 2014-06 The University of Tokyo Graduate School of Science Department of Biophysics and Biochemistry 2009-04 -- 2011-03 The University of Tokyo Graduate School of Science Department of Biophysics and Biochemistry 2005-04 -- 2009-03 The University of Tokyo School of Science Department of Biophysics and Biochemistry - Degree
2014-06 博士(理学) 東京大学 - Academic societies
-- (current) THE RNA SOCIETY OF JAPAN -- (current) THE MOLECULAR BIOLOGY SOCIETY OF JAPAN 2022-06 -- (current) The Japanese Biochemical Society - Honors & Awards
2023-03 RIKEN BAIHO Award (RIKEN Excellent Achievement Award) Novel mechanism for the suppression of the integrated stress response by a viral protein 2023-01 Presentation Award Biology Prize Selective translation driven by spatial sequestration 2019-09 EMBL Advanced Training Centre Corporate Partnership Programme Fellowship 2018-08 Nature Structural & Molecular Biology Poster Prize [International symposium "Proteins: From the Cradle to the Grave"] 2018-06 Travel Award RNA 2018 2016-12 Poster Award - Articles
- LLP1 is a pyrophosphatase involved in homeostasis/quality control of dolichol-linked oligosaccharide
Li Sheng-Tao; Kamada Katsuhiko; Honda Akinobu; Seino ...
The Journal of cell biology/224(11), 2025-11-03 - Ultra-parallel ribosome profiling platform with RNA-dependent RNA amplification
Shichino Yuichi; Mito Mari; Kinugasa Yasuha; Wakigawa ...
bioRxiv, 2025-08-07 - Expanding toolkit for RNP granule transcriptomics
Shichino Yuichi; Iwasaki Shintaro
Polymer Journal/57/pp.873-883, 2025-08 - Sequence grammar and dynamics of subcellular translation revealed by APEX-Ribo-Seq
Tomuro Kotaro; Akaiwa Takanori; Harada Akane; Kobayash...
bioRxiv, 2025-05-29 - EIF3D safeguards the homeostasis of key signaling pathways in human primed pluripotency
Okubo Chikako; Nakamura Michiko; Sato Masae; Shichino ...
Science Advances/11(15)/p.eadq5484, 2025-04-11 - Ribo-Seqが紐解く翻訳・複合体形成・局在化の協奏
七野 悠一
生物工学会誌/103(3)/p.127, 2025-03 - Internal cap-initiated translation for efficient protein production from circular mRNA
Fukuchi Kosuke; Nakashima Yuko; Abe Naoko; Kimura Sei...
Nature Biotechnology, 2025-02-19 - Girolline is a sequence context-selective modulator of eIF5A activity
Schneider-Poetsch Tilman; Dang Yongjun; Iwasaki Wakana...
Nature Communications/16(1)/p.223, 2025-01-10 - Translation of zinc finger domains induces ribosome collision and Znf598-dependent mRNA decay in zebrafish
Ishibashi Kota; Shichino Yuichi; Han Peixun; Wakabayas...
PLOS Biology/22(12)/pp.e3002887-e3002887, 2024-12-05 - Giant virus creates subcellular environment to overcome codon– tRNA mismatch
Zhang Ruixuan; Mayer Lotte; Hikida Hiroyuki; Shichino ...
bioRxiv, 2024-10-07 - eIF4A1 enhances LARP1-mediated translational repression during mTORC1 inhibition
Shichino Yuichi; Yamaguchi Tomokazu; Kashiwagi Kazuhir...
Nature Structural & Molecular Biology/31(10)/pp.1557-1566, 2024-10 - DMDA-PatA mediates RNA sequence-selective translation repression by anchoring eIF4A and DDX3 to GNG motifs
Saito Hironori; Handa Yuma; Chen Mingming; Schneider-P...
Nature Communications/15(1), 2024-09-02 - Calibrated ribosome profiling assesses the dynamics of ribosomal flux on transcripts
Tomuro Kotaro; Mito Mari; Toh Hirotaka; Kawamoto Naoh...
Nature Communications/15(1), 2024-08-26 - Translational regulation enhances distinction of cell types in the nervous system
Ichinose Toshiharu; Kondo Shu; Kanno Mai; Shichino Yu...
eLife/12, 2024-07-16 - Translation variation across genetic backgrounds reveals a post-transcriptional buffering signature in yeast
Teyssonniere Elie M; Shichino Yuichi; Mito Mari; Fried...
Nucleic Acids Research/52(5)/pp.2434-2445, 2024-03-21 - dCas13-mediated translational repression for accurate gene silencing in mammalian cells
Apostolopoulos Antonios; Kawamoto Naohiro; Chow Siu Yu...
Nature Communications/15(1)/pp.2205-2205, 2024-03-11 - Minimal upstream open reading frame of Per2 mediates phase fitness of the circadian clock to day/night physiological body temperature rhythm.
Miyake Takahito; Inoue Yuichi; Shao Xinyan; Seta Take...
Cell reports/42(3)/pp.112157-112157, 2023-03-28 - ILF3 prion-like domain regulates gene expression and fear memory under chronic stress.
Yamashita Akira; Shichino Yuichi; Fujii Kazuki; Koshid...
iScience/26(3)/pp.106229-106229, 2023-03-17 - A parasitic fungus employs mutated eIF4A to survive on rocaglate-synthesizing Aglaia plants.
Chen Mingming; Kumakura Naoyoshi; Saito Hironori; Mull...
eLife/12, 2023-02-28 - Multifarious Translational Regulation during Replicative Aging in Yeast.
Zhao Tianyu; Chida Asaka; Shichino Yuichi; Choi Dongw...
Journal of fungi (Basel, Switzerland)/8(9)/pp.938-938, 2022-09-05 - Compounds for selective translational inhibition.
Shichino Yuichi; Iwasaki Shintaro
Current opinion in chemical biology/69/pp.102158-102158, 2022-08 - Selective translation of epigenetic modifiers affects the temporal pattern and differentiation of neural stem cells.
Wu Quan; Shichino Yuichi; Abe Takaya; Suetsugu Taeko; ...
Nature communications/13(1)/pp.470-470, 2022-01-25 - eIF2B-capturing viral protein NSs suppresses the integrated stress response.
Kashiwagi Kazuhiro; Shichino Yuichi; Osaki Tatsuya; Sa...
Nature communications/12(1)/pp.7102-7102, 2021-12-07 - Combinatorial analysis of translation dynamics reveals eIF2 dependence of translation initiation at near-cognate codons.
Ichihara Kazuya; Matsumoto Akinobu; Nishida Hiroshi; K...
Nucleic acids research/49(13)/pp.7298-7317, 2021-07-21 - Dual targeting of DDX3 and eIF4A by the translation inhibitor rocaglamide A.
Chen Mingming; Asanuma Miwako; Takahashi Mari; Shichin...
Cell chemical biology/28(4)/pp.475-486, 2021-04-15 - more...
- LLP1 is a pyrophosphatase involved in homeostasis/quality control of dolichol-linked oligosaccharide
- Books
- 75 RNP顆粒研究を加速するトランスクリプトーム解析技術
白木 賢太郎; 七野 悠一
相分離生物学の全貌/東京化学同人, 2020-11
- 75 RNP顆粒研究を加速するトランスクリプトーム解析技術
- Conference, etc.
- Analysis of the nuclear dot formation by meiRNA, a non-coding RNA species essential for meiosis.
Shichino Yuichi; Yamashita Akira; Yamamoto Masayuki
The Sixth International Fission Yeast Meeting/2011-06 - Functional analysis of meiRNA, a non-coding RNA species essential for meiosis in fission yeast.
Shichino Yuichi; Yamashita Akira; Yamamoto Masayuki
EMBO Conference on Fission Yeast: pombe 2013/2013-06 - Spatial control in the Mmi1/DSR system that selectively eliminates meiotic transcripts.
Shichino Yuichi; Yamashita Akira; Yamamoto Masayuki
Pombe2015 (8th International Fission Yeast Meeting)/2015-06 - 分裂酵母のYTHドメインタンパク質Mmi1は減数分裂特異的なmRNAの核内凝集を促進し翻訳を抑制する
七野 悠一; 山本 正幸; 山下 朗
日本分子生物学会年会プログラム・要旨集(Web)/2016 - The YTH domain-containing protein Mmi1 induces intranuclear foci formation of meiotic transcripts through its self-interaction and sequesters them from the translation machinery.
Shichino Yuichi; Yamamoto Masayuki; Yamashita Akira
RNA 2016 (21st Annual Meeting of the RNA society)/2016-06 - Selective translation mechanism through two paralogs of eukaryotic initiation factor 4A
Shichino Yuichi; Mito Mari; Iwasaki Shintaro
International symposium "Proteins; From the cradle to the grave"/2018-08-26 - Eukaryotic initiation factor 4A paralogs promote selective translation to modulate the response to mTOR inhibition
七野 悠一
EMBO Workshop: Protein Synthesis and Translation Control/2019-09-06 - 翻訳開始因子eIF4Aのパラログは選択的にmRNAに結合しmTOR阻害に伴う翻訳抑制を調節する
七野 悠一; 水戸 麻理; 岩崎 信太郎
第43回 日本分子生物学会年会 1F-06「拡大するTOR世界の新展開」/2020-12-02--2020-12-04 - A specific eIF4A paralog facilitates LARP1-mediated translation repression during mTORC1 inhibition
Shichino Yuichi; Mito Mari; Ingolia Nicholas T.; Iwasa...
RNA 2021/2021-05-24--2021-06-04 - A specific eIF4A paralog facilitates LARP1-mediated translation repression during mTORC1 inhibition
Shichino Yuichi; Mito Mari; Ingolia Nicholas T.; Iwasa...
EMBL Conference: Protein Synthesis and Translational Control/2021-09-07--2021-09-10 - 翻訳開始因子eIF4A1はLARP1による翻訳抑制を促進する
七野 悠一; 水戸 麻理; 柏木 一宏; 髙橋 真梨; 伊藤 拓宏; Ingolia Nicholas...
日本プロテオーム学会2022年大会/2022-08-09 - Novel repressive role of eIF4A1 during mTORC1 inhibition
Shichino Yuichi
第60回生物物理学会年会/2022-09-29 - P-bodyのトランスクリプトーム解析により明らかとなった翻訳の時空間的制御の重要性
七野 悠一
基礎生物学研究所部門公開セミナー/2022-11-08 - Transcriptomics in P-bodies reveals the importance of spatiotemporal regulation of translation
Shichino Yuichi; Mito Mari; Iwasaki Shintaro
第95回 日本生化学会大会/2022-11-09 - P-bodyのトランスクリプトーム解析により明らかになる時空間的制御の翻訳における重要性
七野 悠一; 水戸 麻理; 岩崎 信太郎
第45回日本分子生物学会年会/2022-11-30--2022-12-02 - Transcriptomics in P-bodies reveals the selective mRNA release to modulate translation upon DNA damage
Shichino Yuichi; Mito Mari; Iwasaki Shintaro
第 24 回 日本 RNA 学会年会/2023-07-05--2023-07-07 - Novel Mechanism of Translation Regulation Explored by the Transcriptome Analysis of Membrane-less Organelles
七野 悠一
第6回 ExCELLSシンポジウム/2024-01-22--2024-01-23 - Transcriptomics in P-bodies reveals the selective mRNA release to modulate translation
Shichino Yuichi; Mito Mari; Iwasaki Shintaro
IUPAB2024/2024-06-24 - Compilation of Local Translation Atlas
七野 悠一; 戸室 幸太郎; 岩崎 信太郎
第76回 日本細胞生物学会年会/2024-07-18 - Understanding components of granules by fluorescence-activated particle sorting (FAPS)
Shichino Yuichi
The 5th Asia RNA Club/2024-08-16 - 翻訳における時空間制御の包括的理解を目指して
七野 悠一
第461回つくば分子生命科学セミナー/2024-09-12 - APEX-Ribo-Seqによる局所翻訳アトラスの編纂
七野 悠一
第3回 タンパク質シンポジウム/2025-01-24 - APEX-Ribo-Seqによる局所翻訳アトラスの編纂
七野 悠一
日本プロテオーム学会2025年大会/2025-08-06--2025-08-08
- Analysis of the nuclear dot formation by meiRNA, a non-coding RNA species essential for meiosis.
(Last updated: 2025-10-01)