叶 秀彩(ヨウ シュウサイ)
- 所属
- システム情報系
- 職名
- 准教授
- ORCID
- 0000-0002-5547-3919
- eメール
- +N:M>J86>Xek6IXel8HaIHJ@J76a68a?E
- 研究室
- 情報数理研究室
- 研究分野
数理情報学 - 研究キーワード
特徴選択、クラスタリング、分類、機械学習、 データ解析、バイオインフォマティクス、ネットワークコンピューティング - 研究課題
データコラボレーション解析による分散協調特徴量選択手法の研究 2022-04 -- 2026-03 叶秀彩 日本学術振興会/基盤研究(C) 4,160,000円 - 職歴
2024-01 -- (現在) 筑波大学システム情報系准教授 2018-04 -- 2023-12 筑波大学システム情報系助教 2014-07 -- 2018-03 筑波大学システム情報系研究員 2014-05 -- 2014-06 筑波大学システム情報系博士特別研究員 - 学歴
2010-04 -- 2014-03 筑波大学 システム情報研究科 コンピュータサイエンス専攻 - 取得学位
2014-03 博士(工学) 筑波大学 - 所属学協会
2018-12 -- (現在) AAAI 2017-04 -- (現在) CBEES 2014-01 -- (現在) IEEE - 受賞
2024-09 令和5年度 筑波大学若手教員奨励賞 2023-04 令和4年度システム情報系教育貢献賞 2019-05 ICMHI国際学会 優秀口頭発表賞 2018-10 IEEE CBDCom国際学会 優秀論文賞 2017-05 CMHI国際学会 優秀論文賞 2017-02 ICMLC国際学会 優秀口頭発表賞 2016-02 ICMLC国際学会 優秀口頭発表賞 - 論文
- Multi-Omics clustering by integrating clinical features from large language model
Ye Xiucai; Shi Tianyi; Huang Dong; Sakurai Tetsuya
Methods/233/pp.64-71, 2025-04 - HMAMP: Designing Highly Potent Antimicrobial Peptides Using a Hypervolume-Driven Multiobjective Deep Generative Model
Wang Li; Liu Yiping; Fu Xiangzheng; Ye Xiucai; Shi J...
JOURNAL OF MEDICINAL CHEMISTRY/68(8)/pp.8346-8360, 2025-04-15 - Spatio-temporal epidemic forecasting using mobility data with LSTM networks and attention mechanism
Jiao Shihu; Wang Yu; Ye Xiucai; Nagahara Larry; Sakur...
Scientific Reports/15( 9603), 2025-03 - OmniClust: A versatile clustering toolkit for single-cell and spatial transcriptomics data
Cui Yaxuan; Cui Yang; Ding Yi; Nakai Kenta; Wei Leyi...
Methods/238/pp.84-94, 2025-03 - DRL-UPPS: User Trajectory Privacy Protection Strategy Based on Deep Reinforcement Learning in Mobile Crowdsensing
He Ding; Zhang Jing; Xu Li; Liu Yanhua; Ye Xiucai
IEEE TRANSACTIONS ON COMPUTATIONAL SOCIAL SYSTEMS, 2025-03-03 - MultiCycPermea: accurate and interpretable prediction of cyclic peptide permeability using a multimodal image-sequence model
Wang Zixu; Chen Yangyang; Shang Yifan; Yang Xiulong; ...
BMC Biology/23(63), 2025-02 - Image-based generation for molecule design with SketchMol
Wang Zixu; Chen Yangyang; Ma Pengsen; Yu Zhou; Wang ...
NATURE MACHINE INTELLIGENCE/Epub, 2025-02-13 - Robust feature learning using contractive autoencoders for multi-omics clustering in cancer subtyping
Guo Mengke; Ye Xiucai; Huang Dong; Sakurai Tetsuya
METHODS/233/pp.52-60, 2025-01 - Integrating Biological Language Processing and Memory Attention Model for Protein-DNA Binding Residue Prediction
Guan Shixuan; Ye Xiucai; Sakurai Tetsuya
Proceedings of IEEE International Conference on Bioinformatics and Biomedicine (BIBM)/pp.25-30, 2024-12 - Selecting interpretable features for cancer subtyping on multi-omics data
Shi Tianyi; Ye Xiucai; Huang Dong; Sakurai Tetsuya
Proceedings of IEEE International Conference on Bioinformatics and Biomedicine (BIBM)/pp.1155-1160, 2024-12 - Lightweight privacy-preserving authenticated key agreements using physically unclonable functions for internet of drones
Lee Tian-Fu; Ye Xiucai; Huang Wei-Jie
JOURNAL OF INFORMATION SECURITY AND APPLICATIONS/87, 2024-12 - Cancer subtype identification by multi-omics clustering based on interpretable feature and latent subspace learning
Shi Tianyi; Ye Xiucai; Huang Dong; Sakurai Tetsuya
METHODS/231/pp.144-153, 2024-11 - DTS-AdapSTNet: an adaptive spatiotemporal neural networks for traffic prediction with multi-graph fusion
Shi Wenlong; Zhang Jing; Zhong Xiangxuan; Chen Xiaopi...
PEERJ COMPUTER SCIENCE/10, 2024-11-29 - PCDP-CRLPPM: a classified regional location privacy-protection model based on personalized clustering with differential privacy in data management
Shi Wenlong; Zhang Jing; Chen Xiaoping; Ye Xiucai
The Computer Journal/68(4)/pp.372-396, 2024-11 - An interpretable deep learning model predicts RNA-small molecule binding sites
Xi Wenyu; Wang Ruheng; Wang Li; Ye Xiucai; Liu Mingy...
FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE/159/pp.557-566, 2024-10 - Identification of Spatial Domains, Spatially Variable Genes, and Genetic Association Studies of Alzheimer Disease with an Autoencoder-based Fuzzy Clustering Algorithm
Cui Yaxuan; Wei Leyi; Wang Ruheng; Ye Xiucai; Sakurai...
CURRENT BIOINFORMATICS/19(8)/pp.765-776, 2024-10 - DiffSeqMol: A Non-Autoregressive Diffusion-Based Approach for Molecular Sequence Generation and Optimization
Wang Zixu; Chen Yangyang; Guo Xiulan; Li Yayang; Li ...
CURRENT BIOINFORMATICS/Epub, 2024-09-20 - Mapping autophagy-related membrane contact site proteins and complexes with AutoMCS Navigator
Liu Tianyuan; Pan Xianrun; Ren Liping; Ye Xiucai; Zhe...
AUTOPHAGY/Epub, 2024-08-27 - Stitch-Able Split Learning Assisted Multi-UAV Systems
Sun Tingkai; Wang Xiaoyan; Ye Xiucai; Han Biao
IEEE OPEN JOURNAL OF THE COMPUTER SOCIETY/5/pp.418-429, 2024-08-22 - IEA-DP: Information Entropy-driven Adaptive Differential Privacy Protection Scheme for social networks
Zhang Jing; Si Kunliang; Zeng Zuanyang; Li Tongxin; Y...
JOURNAL OF SUPERCOMPUTING/80(14)/pp.20546-20582, 2024-06 - CyclePermea: Membrane Permeability Prediction of Cyclic Peptides with a Multi-Loss Fusion Network
Wang Zixu; Chen Yangyang; Ye Xiucai; Sakurai Tetsuya
Proceedings of the International Joint Conference on Neural Networks (IJCNN), 2024-06 - Deciphering the Complex Characterization of Coding LncRNA
Liu Tianyuan; Ye Xiucai; Sakurai Tetsuya
Proceedings of the International Joint Conference on Neural Networks (IJCNN), 2024-06 - Integrated convolution and self-attention for improving peptide toxicity prediction
Jiao Shihu; Ye Xiucai; Sakurai Tetsuya; Zou Quan; Liu...
BIOINFORMATICS/40(5)/p.btae297, 2024-05 - GeoPM-DMEIRL: A deep inverse reinforcement learning security trajectory generation framework with serverless computing
Huang Yirui; Zhang Jing; Hou Hongming; Ye Xiucai; Che...
FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE/154/pp.123-139, 2024-05 - CodLncScape Provides a Self-Enriching Framework for the Systematic Collection and Exploration of Coding LncRNAs
Liu Tianyuan; Qiao Huiyuan; Wang Zixu; Yang Xinyan; P...
Advanced Science/11(22), 2024-04 - さらに表示...
- Multi-Omics clustering by integrating clinical features from large language model
- 会議発表等
- Multi-omics Data Clustering for Cancer Subtyping via Interpretable Feature Extraction
Shi Tianyi; Ye Xiucai; Sakurai Tetsuya
International Conference on Machine Learning and Computing (ICMLC 2025)/2025-2-14--2025-2-17 - Selecting interpretable features for cancer subtyping on multi-omics data
Shi Tianyi; Ye Xiucai; Huang Dong; Sakurai Tetsuya
IEEE International Conference on Bioinformatics and Biomedicine (BIBM)/2024-12-03--2024-12-06 - CyclePermea: Membrane Permeability Prediction of Cyclic Peptides with a Multi-Loss Fusion Network
Wang Zixu; Chen Yangyang; Ye Xiucai; Sakurai Tetsuya
International Joint Conference on Neural Networks (IJCNN2024)/2024-06-30--2024-7-5 - Deciphering the Complex Characterization of Coding LncRNA
Liu Tianyuan; Ye Xiucai; Sakurai Tetsuya
International Joint Conference on Neural Networks (IJCNN2024)/2024-06-30--2024-7-5 - Multi-omics Clustering for Cancer Subtyping Based on SHAP Values
Shi Tianyi; Ye Xiucai; Sakurai Tetsuya
The 8th International Conference on Medical and Health Informatics (ICMHI 2024)/2024-05-17--2024-5-19 - Opportunities and Challenges: A New Perspective in Functional Diversity of Coding LncRNA and Their Micropeptides
Liu Tianyuan; Ye Xiucai; Sakurai Tetsuya
The 8th International Conference on Medical and Health Informatics (ICMHI 2024)/2024-05-17--2024-5-19 - Exploring Peptide Toxicity Prediction for Intelligent Drug Discovery Using Deep Learning
Jiao Shihu; Ye Xiucai; Sakurai Tetsuya
The 8th International Conference on Medical and Health Informatics (ICMHI 2024)/2024-05-17--2024-5-19 - Hierarchical Deep Learning Architecture for Predicting Protein-DNA Binding Sites
Guan Shixuan; Ye Xiucai; Sakurai Tetsuya
The 8th International Conference on Medical and Health Informatics (ICMHI 2024)/2024-05-17--2024-5-19 - Stgan: Imputation algorithm for spatial transcriptomics based on Generative Adversarial Network
Cui Yaxuan; Ye Xiucai; Sakurai Tetsuya
The 8th International Conference on Medical and Health Informatics (ICMHI 2024)/2024-05-17--2024-5-19 - CPPM: Prediction of cyclic peptide membrane permeability based on multi-loss fusion network
Chen Yangyang; Ye Xiucai; Sakurai Tetsuya
The 8th International Conference on Medical and Health Informatics (ICMHI 2024)/2024-05-17--2024-5-19 - Multi-omics clustering based on interpretable and discriminative features for cancer subtyping
Shi Tianyi; Ye Xiucai; Sakurai Tetsuya
IEEE International Conference on Bioinformatics and Biomedicine (BIBM)/2023-12-05--2023-12-08 - Multi-view Network Embedding with Structure and Semantic Contrastive Learning
Shang Yifan; Ye Xiucai; Sakurai Tetsuya
IEEE International Conference on Multimedia and Expo (ICME2023)/2023-07-10--2023-07-14 - Common and Unique Features Learning in Multi-view Network Embedding
Yifan Shang; Xiucai Ye; Tetsuya Sakurai
International Joint Conference on Neural Networks (IJCNN2023)/2023-06-18--2023-06-23 - scGNGI: Imputing Missing Gene Expression Value with Cell Heterogeneity Based on Low Rank Matrix Recovery
Huang Meng; Ye Xiucai; Sakurai Tetsuya
The 7th International Conference on Medical and Health Informatics (ICMHI 2023)/2023-05-12--2023-05-14 - Discovering Cancers Subtypes Based on Multi-omics Clustering
Tianyi Shi; Xiucai Ye; Tetsuya Sakurai
The 7th International Conference on Medical and Health Informatics (ICMHI 2023)/2023-05-12--2023-05-14 - Enhancing Compound Screening Effectiveness in Drug Research by Refining Screening Approaches
Ru Xiaoqing; Ye Xiucai; Sakurai Tetsuya
The 7th International Conference on Medical and Health Informatics (ICMHI 2023)/2023-05-12--2023-05-14 - Improving Prediction of SARS CoV2 Phosphorylation Sites Using Adaptive Learning Embedding Features
Jiao Shihu; Ye Xiucai; Sakurai Tetsuya
The 7th International Conference on Medical and Health Informatics (ICMHI 2023)/2023-05-12--2023-05-14 - DeepDMPred:Multi view Feature Fusion Method to Predict Drug Molecules
He Shida; Ye Xiucai; Sakurai Tetsuya
The 7th International Conference on Medical and Health Informatics (ICMHI 2023)/2023-05-12--2023-05-14 - Collaborative Future Selection for Distributed Data
Ye Xiucai; Imakura Akira; Sakurai Tetsuya
SIAM Conference on Computational Science and Engineering (CSE23)/2023-02-26--2023-03-03 - Cost-Efficient Integrated Analysis of Distributed Data in Secure Environments
Sakurai Tetsuya; Imakura Akira; Ye Xiucai; Bogdanova Ann...
SIAM Conference on Computational Science and Engineering (CSE23)/2023-02-26--2023-03-03 - Multiview Network Embedding for Drug-target Interaction Prediction
Ye Xiucai; Shang Yifan; Futamura Yasunori; Sakurai Tetsuya
15th International Conference on Machine Learning and Computing (ICMLC)/2023-02-17--2023-02-20 - ToxinMI: improving peptide toxicity prediction by fusing multimodal information based on mutual information
Wei Lesong; Ye Xiucai; Sakurai Tetsuya
The Conference on Research in Adaptive and Convergent Systems/2022-10-03--2022-10-06 - Knowledge distillation-based privacy-preserving data analysis
Huang Dong; Ye Xiucai; Sakurai Tetsuya
The Conference on Research in Adaptive and Convergent Systems/2022-10-03--2022-10-06 - Ensemble Learning for Cluster Number Detection Based on Shared Nearest Neighbor Graph and Spectral Clustering
Zhang Weihang; Ye Xiucai; Sakurai Tetsuya
International Joint Conference on Neural Networks (IJCNN 2022)/2022-7-18--2022-7-23 - Multi-view Network Embedding for Drug-target Interactions Prediction
Shang Yifan; Ye Xiucai; Futamura Yasunori; Yu Liang; Saku...
6th International Conference on Medical and Health Informatics/2022-5-13--2022-5-15 - さらに表示...
- Multi-omics Data Clustering for Cancer Subtyping via Interpretable Feature Extraction
- 知的財産権
- 特徴量選択支援装置、特徴量選択支援プログラム及び特徴量選択支援方法
今倉 暁; 叶 秀彩; 櫻井 鉄也
- 特徴量選択支援装置、特徴量選択支援プログラム及び特徴量選択支援方法
- 担当授業科目
2024-10 -- 2025-02 情報理工後期特別演習Af 筑波大学 2024-10 -- 2025-02 情報理工後期特別演習Bf 筑波大学 2024-10 -- 2025-03 ライフイノベーション博士研究Ⅰ 筑波大学 2024-04 -- 2024-08 情報理工前期特別研究Is 筑波大学 2024-10 -- 2025-02 情報理工前期特別研究IIf 筑波大学 2024-10 -- 2025-03 ライフイノベーション修士研究Ⅲ 筑波大学 2024-10 -- 2025-03 ライフイノベーション修士研究Ⅳ 筑波大学 2024-10 -- 2025-03 ライフイノベーション博士研究Ⅴ 筑波大学 2024-10 -- 2025-03 ライフイノベーション博士前期演習I秋 筑波大学 2024-04 -- 2024-08 コンピュータサイエンス特別演習B 筑波大学 さらに表示... - 授業以外の教育活動
2019-07 -- 2019-07 中高生理工系進学応援シンポジウム及びリケジョサイエンス合宿 ダイバーシティ・アクセシビリティ・キャリアセンター - 学協会等委員
2025-02 -- 2025-02 The 17th International Conference on Machine Learning and Computing Session Chair (ONSITE SESSION 1 Machine Learning Theory and Algorithms) 2024-06 -- 2025-02 The 17th International Conference on Machine Learning and Computing Program Co-Chair 2024-03 -- 2024-12 Future Generation Computer Systems Special Issue on Explainable Artificial Intelligence in Drug Discovery and Development Guest Editor 2023-06 -- 2024-05 The 8th International Conference on Medical and Health Informatics Technical Program Committee 2023-06 -- 2024-02 The 16th International Conference on Machine Learning and Computing Program Chair 2023-05 -- 2023-05 The 7th International Conference on Medical and Health Informatics Session Chair (Special Session 4 Machine Learning Algorithms for Bio-Medical Data Analysis) 2022-06 -- 2023-05 The 7th International Conference on Medical and Health Informatics Technical Program Committee 2023-02 -- 2023-02 The 15th International Conference on Machine Learning and Computing Session Chair (Online Parallel Session 7: Image Detection and Application) 2022-08 -- 2023-02 The 15th International Conference on Machine Learning and Computing Technical Program Committee 2022-09 -- 2022-11 The Thirty-Seven AAAI Conference on Artificial Intelligence Program Committee さらに表示... - 学内管理運営業績
2023-04 -- (現在) 情報理工学位プログラム 施設安全衛⽣管理・省エネルギー委員会 委員 2024-04 -- (現在) 情報科学類 世話人 専門導入科目「情報科学概論」世話人 2024-04 -- (現在) 情報科学類、情報理工学位プログラム 国際交流委員会 アドバイザー 2024-04 -- 2025-03 情報科学類 部局情報環境委員会 委員 2024-04 -- 2025-03 情報科学類 計算機運用委員会 委員長 2023-04 -- 2025-03 情報科学類 世話人 「情報特別演習」世話人 2023-04 -- 2025-03 情報科学類 広報企画委員会 委員 2023-04 -- 2025-03 情報理工学位プログラム 英語プログラム推進室 推進室員 2023-04 -- 2024-03 情報科学類 進路指導委員会 進路指導担当委員 2020-04 -- 2024-03 情報科学類 クラス担任 さらに表示...
(最終更新日: 2025-05-05)